Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 C18orf15-201ENST00000623680 2534 ntBASIC15.35■□□□□ 0.05
VPS33AQ96AX1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VPS33AQ96AX1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 UNC93B6-202ENST00000528242 690 ntBASIC15.34■□□□□ 0.05
VPS33AQ96AX1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
VPS33AQ96AX1 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
VPS33AQ96AX1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FAM45BP-202ENST00000592932 1624 ntBASIC15.33■□□□□ 0.04
VPS33AQ96AX1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 GPX1P2-201ENST00000429271 606 ntBASIC15.33■□□□□ 0.04
VPS33AQ96AX1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 RHOQP3-201ENST00000437982 621 ntBASIC15.33■□□□□ 0.04
VPS33AQ96AX1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
VPS33AQ96AX1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms