Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ATP6V0A1Q93050 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 AC104596.2-201ENST00000512793 793 ntBASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 TMEM261P1-201ENST00000604899 340 ntBASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 WFDC1-204ENST00000613603 549 ntBASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 CLK3P2-201ENST00000427566 1453 ntBASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
ATP6V0A1Q93050 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 CDC14C-201ENST00000428251 1719 ntBASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 RPL13P2-201ENST00000440687 659 ntBASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 LINC02447-202ENST00000501888 2146 ntBASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 LINC01115-203ENST00000606068 577 ntBASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 MIR8072-201ENST00000614241 80 ntBASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 AC124067.4-201ENST00000519691 2379 ntBASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6V0A1Q93050 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6V0A1Q93050 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms