Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC011477.6-201ENST00000604980 1927 ntBASIC18.1■□□□□ 0.49
ERCC4Q92889 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 FOXO1B-201ENST00000504678 1527 ntBASIC18.1■□□□□ 0.49
ERCC4Q92889 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.1■□□□□ 0.49
ERCC4Q92889 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.1■□□□□ 0.49
ERCC4Q92889 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ERCC4Q92889 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.1■□□□□ 0.49
ERCC4Q92889 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 AC092865.6-201ENST00000642101 219 ntBASIC18.1■□□□□ 0.49
ERCC4Q92889 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ERCC4Q92889 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ERCC4Q92889 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ERCC4Q92889 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
ERCC4Q92889 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC4Q92889 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC4Q92889 AC106881.1-201ENST00000605849 3329 ntBASIC18.09■□□□□ 0.49
ERCC4Q92889 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC4Q92889 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ERCC4Q92889 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.09■□□□□ 0.49
ERCC4Q92889 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC4Q92889 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC4Q92889 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC4Q92889 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC4Q92889 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.08■□□□□ 0.49
ERCC4Q92889 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 WASH6P-202ENST00000359512 1437 ntBASIC18.08■□□□□ 0.49
ERCC4Q92889 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
ERCC4Q92889 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ERCC4Q92889 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.08■□□□□ 0.49
ERCC4Q92889 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
ERCC4Q92889 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC4Q92889 PMS2P7-201ENST00000506558 1336 ntBASIC18.08■□□□□ 0.49
ERCC4Q92889 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC4Q92889 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC4Q92889 FDX1P1-201ENST00000449115 551 ntBASIC18.08■□□□□ 0.48
ERCC4Q92889 RPL13AP23-201ENST00000480739 586 ntBASIC18.08■□□□□ 0.48
ERCC4Q92889 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC4Q92889 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC4Q92889 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC4Q92889 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.08■□□□□ 0.48
ERCC4Q92889 AC145285.3-201ENST00000564603 959 ntBASIC18.08■□□□□ 0.48
ERCC4Q92889 AP002472.1-201ENST00000577490 586 ntBASIC18.08■□□□□ 0.48
ERCC4Q92889 AC099522.2-201ENST00000607001 744 ntBASIC18.08■□□□□ 0.48
ERCC4Q92889 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms