Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PHF3Q92576 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.32□□□□□ -0.12
PHF3Q92576 EEF1DP4-201ENST00000446006 880 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 LINC02447-202ENST00000501888 2146 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 AP002414.2-201ENST00000591780 3365 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.32□□□□□ -0.12
PHF3Q92576 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PHF3Q92576 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.32□□□□□ -0.12
PHF3Q92576 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
PHF3Q92576 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.32□□□□□ -0.12
PHF3Q92576 USP32P1-208ENST00000506594 1164 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.32□□□□□ -0.12
PHF3Q92576 AC106886.1-201ENST00000568660 600 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 AL359881.2-201ENST00000602973 570 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 AL596087.1-201ENST00000400979 1969 ntBASIC14.32□□□□□ -0.12
PHF3Q92576 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
PHF3Q92576 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHF3Q92576 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF3Q92576 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PHF3Q92576 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PHF3Q92576 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PHF3Q92576 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PHF3Q92576 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 SPDYE17-201ENST00000412399 783 ntBASIC14.31□□□□□ -0.12
PHF3Q92576 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.31□□□□□ -0.12
PHF3Q92576 AL589987.1-201ENST00000453380 819 ntBASIC14.31□□□□□ -0.12
PHF3Q92576 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.31□□□□□ -0.12
PHF3Q92576 SNX29P1-201ENST00000548357 1007 ntBASIC14.31□□□□□ -0.12
PHF3Q92576 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
PHF3Q92576 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PHF3Q92576 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 CLK3P2-201ENST00000427566 1453 ntBASIC14.31□□□□□ -0.12
PHF3Q92576 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PHF3Q92576 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
PHF3Q92576 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PHF3Q92576 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.31□□□□□ -0.12
PHF3Q92576 TTTY23B-201ENST00000442790 549 ntBASIC14.31□□□□□ -0.12
PHF3Q92576 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.31□□□□□ -0.12
PHF3Q92576 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.31□□□□□ -0.12
PHF3Q92576 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
PHF3Q92576 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.31□□□□□ -0.12
PHF3Q92576 AL391069.4-201ENST00000609583 481 ntBASIC14.31□□□□□ -0.12
PHF3Q92576 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms