Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 KRT18P3-201ENST00000451602 1288 ntBASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.46□□□□□ -0.25
RTN4IP1Q8WWV3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RTN4IP1Q8WWV3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 SBF1P1-201ENST00000444527 5631 ntBASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 HAUS4P1-201ENST00000406739 1145 ntBASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RTN4IP1Q8WWV3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms