Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 AC022616.7-201ENST00000525383 220 ntBASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 AP002469.2-201ENST00000531724 424 ntBASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 AC074051.2-201ENST00000565115 352 ntBASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 MIR3909-201ENST00000579518 119 ntBASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 MIR4321-201ENST00000592276 80 ntBASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM4Q8WVI0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AC136759.1-202ENST00000530858 2194 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 SBF1P1-201ENST00000444527 5631 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 RNU1-129P-201ENST00000384064 167 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 U1.21-201ENST00000580816 167 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AC012306.2-201ENST00000609350 630 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms