Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SLC25A39P2-201ENST00000537614 270 ntBASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 LINC01225-203ENST00000563550 1244 ntBASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 AL671883.3-201ENST00000603274 991 ntBASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP1Q8TDR0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 CICP13-201ENST00000422015 2789 ntBASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 AC005237.2-201ENST00000434368 219 ntBASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 AC069335.1-201ENST00000489972 472 ntBASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 AC026979.3-201ENST00000607315 403 ntBASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP1Q8TDR0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 MIR3687-2-201ENST00000577708 61 ntBASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 MIR3687-1-201ENST00000614492 61 ntBASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 AC055717.3-201ENST00000622967 595 ntBASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP1Q8TDR0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms