Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
FNDC9Q8TBE3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AC243562.2-201ENST00000561247 970 ntBASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AC010336.2-201ENST00000564226 506 ntBASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AC009407.1-201ENST00000568958 598 ntBASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AL033527.5-202ENST00000641632 1098 ntBASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
FNDC9Q8TBE3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AC132872.4-202ENST00000622924 2756 ntBASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 FAM207CP-201ENST00000443486 507 ntBASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 LINC02560-201ENST00000596379 459 ntBASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FNDC9Q8TBE3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms