Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 KRT8P37-201ENST00000451609 1420 ntBASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 RNA5SP421-201ENST00000516864 134 ntBASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 AC027369.6-201ENST00000525520 931 ntBASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 BANF1P1-201ENST00000553684 263 ntBASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMARCC2Q8TAQ2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 AC144831.1-201ENST00000573312 2656 ntBASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 HYMAI-201ENST00000635591 3347 ntBASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 AC092580.3-201ENST00000430932 139 ntBASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 SPCS2P1-201ENST00000561636 679 ntBASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 SPDYE12P-201ENST00000618416 771 ntBASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMARCC2Q8TAQ2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 AL596257.1-201ENST00000641463 2694 ntBASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.58■□□□□ 0.57
SMARCC2Q8TAQ2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AC097359.3-201ENST00000603982 1210 ntBASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AC026979.3-201ENST00000607315 403 ntBASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 AL589739.1-201ENST00000607720 493 ntBASIC18.58■□□□□ 0.56
SMARCC2Q8TAQ2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms