Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GGTLC5P-201ENST00000617623 998 ntBASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFWD2Q8NHY2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 AC134407.2-201ENST00000625089 1978 ntBASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 AKR1C7P-201ENST00000305623 895 ntBASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 SAPCD2P3-201ENST00000455031 850 ntBASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 UNC93B7-201ENST00000509439 705 ntBASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 SART3-203ENST00000546611 1184 ntBASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 REXO1L6P-202ENST00000619970 1078 ntBASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.79■□□□□ 0.12
RFWD2Q8NHY2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 FGD5P1-202ENST00000614866 2498 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 GRK6P1-201ENST00000400595 1711 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 DUSP5P1-201ENST00000441325 1139 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 AC093724.1-201ENST00000448659 1027 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 AL355877.3-201ENST00000622820 899 ntBASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RFWD2Q8NHY2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms