Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL22A1Q8NFW1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AC104073.2-201ENST00000453737 312 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 NDUFS6P1-201ENST00000485187 316 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AC074138.1-201ENST00000611182 1303 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 MESTP3-201ENST00000503460 968 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 SNORD3B-2-202ENST00000571722 791 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 MIR4313-201ENST00000580760 101 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 AC009084.3-201ENST00000623356 437 ntBASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.6■□□□□ 0.89
COL22A1Q8NFW1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 DUX4L47-201ENST00000566374 394 ntBASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 MIR6842-201ENST00000612539 65 ntBASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
COL22A1Q8NFW1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 CAP2P1-201ENST00000557743 1390 ntBASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 NAP1L6-202ENST00000641404 1222 ntBASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL22A1Q8NFW1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL22A1Q8NFW1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL22A1Q8NFW1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.58■□□□□ 0.88
COL22A1Q8NFW1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.58■□□□□ 0.88
COL22A1Q8NFW1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms