Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCDC168Q8NDH2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 KRT18P25-201ENST00000508931 1278 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 AC124947.2-201ENST00000547118 1133 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 CEP164P1-201ENST00000455142 418 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 CTBP2P4-201ENST00000513884 920 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 AC013355.1-201ENST00000562625 723 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 AC000095.1-201ENST00000603208 874 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 ECM1P1-201ENST00000604092 1279 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 KRT8P35-201ENST00000483942 1338 ntBASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCDC168Q8NDH2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC168Q8NDH2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC168Q8NDH2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC168Q8NDH2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC168Q8NDH2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCDC168Q8NDH2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
CCDC168Q8NDH2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AC139713.2-201ENST00000641328 2723 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AL138781.2-201ENST00000617896 1843 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AC136604.1-201ENST00000418535 575 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AC141586.1-203ENST00000567242 366 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 AL138688.1-201ENST00000624851 1594 ntBASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCDC168Q8NDH2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms