Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 DBET-201ENST00000630918 3363 ntBASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
C11orf42Q8N5U0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 METTL21AP1-201ENST00000438852 635 ntBASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
C11orf42Q8N5U0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 BANF1P1-201ENST00000553684 263 ntBASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 AC025678.2-201ENST00000562061 970 ntBASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 AC093028.1-201ENST00000622998 982 ntBASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 Z92544.3-201ENST00000624747 417 ntBASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 AC104581.4-201ENST00000623126 3052 ntBASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf42Q8N5U0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms