Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC33Q8N5R6 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 RN7SL692P-201ENST00000464677 288 ntBASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 SPDYE22P-201ENST00000582158 798 ntBASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC33Q8N5R6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 RNA5SP410-201ENST00000516285 106 ntBASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 AL596325.1-201ENST00000563991 1082 ntBASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 RN7SL828P-201ENST00000607615 303 ntBASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 AL358472.5-202ENST00000641448 1267 ntBASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 CETN4P-206ENST00000642099 2168 ntBASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 TSPY26P-202ENST00000565928 3884 ntBASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC33Q8N5R6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC33Q8N5R6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms