Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
VPS8Q8N3P4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 AC020658.6-201ENST00000623564 1870 ntBASIC24.46■■□□□ 1.51
VPS8Q8N3P4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC24.46■■□□□ 1.51
VPS8Q8N3P4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 ACTG1P3-201ENST00000431775 1114 ntBASIC24.45■■□□□ 1.51
VPS8Q8N3P4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 AC022137.2-201ENST00000503482 481 ntBASIC24.45■■□□□ 1.51
VPS8Q8N3P4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 ENPP7P5-201ENST00000541031 1031 ntBASIC24.45■■□□□ 1.51
VPS8Q8N3P4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC24.45■■□□□ 1.51
VPS8Q8N3P4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS8Q8N3P4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AL139384.1-201ENST00000612143 3047 ntBASIC24.44■■□□□ 1.5
VPS8Q8N3P4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 RNU1-114P-201ENST00000365297 166 ntBASIC24.44■■□□□ 1.5
VPS8Q8N3P4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 RPL5P21-201ENST00000404620 815 ntBASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AC012441.1-201ENST00000446669 685 ntBASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AC106760.1-201ENST00000508690 800 ntBASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC24.44■■□□□ 1.5
VPS8Q8N3P4 AL162274.1-201ENST00000617191 1098 ntBASIC24.44■■□□□ 1.5
VPS8Q8N3P4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS8Q8N3P4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms