Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AC093433.1-201ENST00000458048 571 ntBASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEFF1Q8IYR6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PCDH8P1-201ENST00000428983 2773 ntBASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AC026954.1-201ENST00000429771 1293 ntBASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AC012441.1-201ENST00000446669 685 ntBASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 RPL13AP20-201ENST00000459725 609 ntBASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AC106760.1-201ENST00000508690 800 ntBASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 SLED1-202ENST00000512051 380 ntBASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TMEFF1Q8IYR6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEFF1Q8IYR6 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms