Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 PHKG1P2-201ENST00000457537 863 ntBASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 YBX1P5-201ENST00000509441 847 ntBASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 ALG1L8P-201ENST00000533887 760 ntBASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 MIR4469-201ENST00000583919 79 ntBASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 AC090616.6-203ENST00000579186 1945 ntBASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDKL3Q8IVW4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 LINC00554-201ENST00000564841 3011 ntBASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.35■□□□□ 0.21
CDKL3Q8IVW4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 AL627223.1-201ENST00000416693 442 ntBASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CDKL3Q8IVW4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms