Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 SCARNA2-201ENST00000458748 420 ntBASIC16.13■□□□□ 0.17
PACS2Q86VP3 AC106795.1-205ENST00000512851 1056 ntBASIC16.13■□□□□ 0.17
PACS2Q86VP3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 REXO1L8P-201ENST00000604378 1897 ntBASIC16.13■□□□□ 0.17
PACS2Q86VP3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PACS2Q86VP3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.13■□□□□ 0.17
PACS2Q86VP3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 AL023775.1-201ENST00000454907 1746 ntBASIC16.12■□□□□ 0.17
PACS2Q86VP3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 AKR1C7P-201ENST00000305623 895 ntBASIC16.12■□□□□ 0.17
PACS2Q86VP3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 AF238378.1-201ENST00000526806 358 ntBASIC16.12■□□□□ 0.17
PACS2Q86VP3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 MTDHP3-201ENST00000594186 672 ntBASIC16.12■□□□□ 0.17
PACS2Q86VP3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PACS2Q86VP3 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PACS2Q86VP3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 AP005117.1-201ENST00000584346 1413 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PACS2Q86VP3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 AL160237.2-201ENST00000556165 472 ntBASIC16.11■□□□□ 0.17
PACS2Q86VP3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.11■□□□□ 0.17
PACS2Q86VP3 AC064862.7-201ENST00000604520 867 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms