Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 AC112504.1-201ENST00000623415 1841 ntBASIC18.85■□□□□ 0.61
CTR9Q6PD62 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.85■□□□□ 0.61
CTR9Q6PD62 LINC02199-201ENST00000506655 2702 ntBASIC18.85■□□□□ 0.61
CTR9Q6PD62 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTR9Q6PD62 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 AC140912.1-201ENST00000577171 1054 ntBASIC18.84■□□□□ 0.61
CTR9Q6PD62 AL391069.4-201ENST00000609583 481 ntBASIC18.84■□□□□ 0.61
CTR9Q6PD62 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.84■□□□□ 0.61
CTR9Q6PD62 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTR9Q6PD62 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTR9Q6PD62 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.83■□□□□ 0.61
CTR9Q6PD62 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTR9Q6PD62 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CTR9Q6PD62 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CTR9Q6PD62 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.83■□□□□ 0.61
CTR9Q6PD62 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTR9Q6PD62 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 AC055876.2-201ENST00000531834 546 ntBASIC18.83■□□□□ 0.6
CTR9Q6PD62 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 AC005225.4-201ENST00000557330 545 ntBASIC18.83■□□□□ 0.6
CTR9Q6PD62 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 AL596325.1-201ENST00000563991 1082 ntBASIC18.83■□□□□ 0.6
CTR9Q6PD62 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CTR9Q6PD62 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.83■□□□□ 0.6
CTR9Q6PD62 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTR9Q6PD62 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 DGCR5-201ENST00000399539 862 ntBASIC18.82■□□□□ 0.6
CTR9Q6PD62 AC087499.6-201ENST00000411576 835 ntBASIC18.82■□□□□ 0.6
CTR9Q6PD62 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 MEP1AP4-201ENST00000423244 1087 ntBASIC18.82■□□□□ 0.6
CTR9Q6PD62 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.82■□□□□ 0.6
CTR9Q6PD62 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTR9Q6PD62 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms