Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 KRT18P27-201ENST00000427733 1299 ntBASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 RNA5SP419-201ENST00000515908 135 ntBASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AC012640.2-201ENST00000561606 901 ntBASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AL805961.1-202ENST00000641562 540 ntBASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 AP002414.3-201ENST00000589352 1468 ntBASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 PI4KAP1-204ENST00000612579 1703 ntBASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMBOX1Q6NT76 ZNF259P1-201ENST00000407656 1365 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AC005840.4-201ENST00000541242 2494 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 PTCHD3P3-201ENST00000403073 906 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 PMS2P2-201ENST00000425039 1128 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 RPS15P9-201ENST00000494093 319 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AL049840.3-201ENST00000602669 611 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 MIR7706-201ENST00000613747 67 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AP001350.2-201ENST00000625104 1094 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 FGD5P1-202ENST00000614866 2498 ntBASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMBOX1Q6NT76 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMBOX1Q6NT76 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms