Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ANKRD55Q3KP44 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ANKRD55Q3KP44 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 RBM17P3-201ENST00000417687 1192 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AC245100.5-201ENST00000452108 331 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 SAPCD2P3-201ENST00000455031 850 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 SCARNA2-201ENST00000458748 420 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 MROH4P-201ENST00000431302 1578 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AC006504.4-201ENST00000592118 1568 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AL365209.1-201ENST00000624418 6473 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 AJ011931.1-201ENST00000618749 2492 ntBASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ANKRD55Q3KP44 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 ELK2BP-201ENST00000415014 1224 ntBASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 RN7SL510P-201ENST00000581311 263 ntBASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 AC012569.1-201ENST00000591191 1524 ntBASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 AL732292.2-201ENST00000609649 430 ntBASIC13.26□□□□□ -0.29
ANKRD55Q3KP44 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms