Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AC011477.6-201ENST00000604980 1927 ntBASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.39■□□□□ 0.53
SHROOM1Q2M3G4 AC006449.5-201ENST00000610658 2098 ntBASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 AL139384.1-201ENST00000612143 3047 ntBASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 BOLA2P3-201ENST00000404566 256 ntBASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 AC026410.3-201ENST00000514280 936 ntBASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 ENPP7P5-201ENST00000541031 1031 ntBASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 AC134312.5-201ENST00000568031 1313 ntBASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHROOM1Q2M3G4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 BAATP1-201ENST00000412284 1225 ntBASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 AC012441.1-201ENST00000446669 685 ntBASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHROOM1Q2M3G4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 AC026954.1-201ENST00000429771 1293 ntBASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 RPL7P3-201ENST00000441388 714 ntBASIC18.36■□□□□ 0.53
SHROOM1Q2M3G4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms