Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 TMEM261P1-201ENST00000604899 340 ntBASIC19.06■□□□□ 0.64
RFX7Q2KHR2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MIR8072-201ENST00000614241 80 ntBASIC19.06■□□□□ 0.64
RFX7Q2KHR2 MIR6752-201ENST00000618442 71 ntBASIC19.06■□□□□ 0.64
RFX7Q2KHR2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.06■□□□□ 0.64
RFX7Q2KHR2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 TTTY23B-201ENST00000442790 549 ntBASIC19.05■□□□□ 0.64
RFX7Q2KHR2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 AC127383.1-201ENST00000444697 1800 ntBASIC19.05■□□□□ 0.64
RFX7Q2KHR2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.05■□□□□ 0.64
RFX7Q2KHR2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AC112492.5-201ENST00000421897 457 ntBASIC19.04■□□□□ 0.64
RFX7Q2KHR2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AC119751.2-201ENST00000504529 210 ntBASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RFX7Q2KHR2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 TMBIM7P-203ENST00000641617 1718 ntBASIC19.03■□□□□ 0.64
RFX7Q2KHR2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RFX7Q2KHR2 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms