Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 AC098850.1-201ENST00000419919 790 ntBASIC19.46■□□□□ 0.71
ATP2B3Q16720 NME2P1-201ENST00000426182 414 ntBASIC19.46■□□□□ 0.71
ATP2B3Q16720 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 RARRES2P5-201ENST00000564013 466 ntBASIC19.46■□□□□ 0.71
ATP2B3Q16720 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 AC063926.2-201ENST00000623766 1308 ntBASIC19.46■□□□□ 0.71
ATP2B3Q16720 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATP2B3Q16720 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.46■□□□□ 0.71
ATP2B3Q16720 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AC123567.1-201ENST00000548294 1261 ntBASIC19.45■□□□□ 0.7
ATP2B3Q16720 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AL391069.4-201ENST00000609583 481 ntBASIC19.45■□□□□ 0.7
ATP2B3Q16720 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AL158212.4-201ENST00000624062 1286 ntBASIC19.45■□□□□ 0.7
ATP2B3Q16720 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 AC138969.3-201ENST00000546612 1459 ntBASIC19.45■□□□□ 0.7
ATP2B3Q16720 AC138932.2-201ENST00000548268 1459 ntBASIC19.45■□□□□ 0.7
ATP2B3Q16720 AC126755.4-201ENST00000549796 1459 ntBASIC19.45■□□□□ 0.7
ATP2B3Q16720 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATP2B3Q16720 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATP2B3Q16720 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AL607033.1-201ENST00000623900 1599 ntBASIC19.44■□□□□ 0.7
ATP2B3Q16720 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 MYCLP2-201ENST00000449268 967 ntBASIC19.44■□□□□ 0.7
ATP2B3Q16720 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 RRP7BP-205ENST00000566851 833 ntBASIC19.44■□□□□ 0.7
ATP2B3Q16720 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AC093726.1-201ENST00000608064 963 ntBASIC19.44■□□□□ 0.7
ATP2B3Q16720 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATP2B3Q16720 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.44■□□□□ 0.7
ATP2B3Q16720 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms