Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.74■□□□□ 0.27
DSC1Q08554 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DSC1Q08554 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DSC1Q08554 REXO1L6P-201ENST00000603433 1515 ntBASIC16.74■□□□□ 0.27
DSC1Q08554 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
DSC1Q08554 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DSC1Q08554 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
DSC1Q08554 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DSC1Q08554 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.74■□□□□ 0.27
DSC1Q08554 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DSC1Q08554 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
DSC1Q08554 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.73■□□□□ 0.27
DSC1Q08554 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.73■□□□□ 0.27
DSC1Q08554 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.73■□□□□ 0.27
DSC1Q08554 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.73■□□□□ 0.27
DSC1Q08554 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.73■□□□□ 0.27
DSC1Q08554 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.73■□□□□ 0.27
DSC1Q08554 CSF2RBP1-201ENST00000447905 391 ntBASIC16.73■□□□□ 0.27
DSC1Q08554 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.73■□□□□ 0.27
DSC1Q08554 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.73■□□□□ 0.27
DSC1Q08554 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.73■□□□□ 0.27
DSC1Q08554 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
DSC1Q08554 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DSC1Q08554 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.72■□□□□ 0.27
DSC1Q08554 AC016694.1-201ENST00000434179 700 ntBASIC16.72■□□□□ 0.27
DSC1Q08554 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
DSC1Q08554 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.72■□□□□ 0.27
DSC1Q08554 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.72■□□□□ 0.27
DSC1Q08554 RNA5SP412-201ENST00000516234 123 ntBASIC16.72■□□□□ 0.27
DSC1Q08554 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
DSC1Q08554 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.72■□□□□ 0.27
DSC1Q08554 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.72■□□□□ 0.27
DSC1Q08554 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.72■□□□□ 0.27
DSC1Q08554 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DSC1Q08554 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 AC006449.5-201ENST00000610658 2098 ntBASIC16.72■□□□□ 0.27
DSC1Q08554 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DSC1Q08554 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
DSC1Q08554 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
DSC1Q08554 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DSC1Q08554 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DSC1Q08554 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DSC1Q08554 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DSC1Q08554 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
DSC1Q08554 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 AC112504.1-201ENST00000623415 1841 ntBASIC16.71■□□□□ 0.27
DSC1Q08554 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
DSC1Q08554 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DSC1Q08554 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
DSC1Q08554 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.71■□□□□ 0.27
DSC1Q08554 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.71■□□□□ 0.27
DSC1Q08554 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.71■□□□□ 0.27
DSC1Q08554 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.71■□□□□ 0.27
DSC1Q08554 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.71■□□□□ 0.27
DSC1Q08554 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.71■□□□□ 0.27
DSC1Q08554 KRT90P-201ENST00000549264 1064 ntBASIC16.71■□□□□ 0.27
DSC1Q08554 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.71■□□□□ 0.27
DSC1Q08554 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DSC1Q08554 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms