Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC20.79■□□□□ 0.92
COL16A1Q07092 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.79■□□□□ 0.92
COL16A1Q07092 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.79■□□□□ 0.92
COL16A1Q07092 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 PSMD4P1-201ENST00000433951 1109 ntBASIC20.79■□□□□ 0.92
COL16A1Q07092 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.79■□□□□ 0.92
COL16A1Q07092 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
COL16A1Q07092 RN7SL258P-201ENST00000478664 300 ntBASIC20.79■□□□□ 0.92
COL16A1Q07092 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.79■□□□□ 0.92
COL16A1Q07092 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.79■□□□□ 0.92
COL16A1Q07092 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.79■□□□□ 0.92
COL16A1Q07092 AL109837.1-201ENST00000603272 613 ntBASIC20.79■□□□□ 0.92
COL16A1Q07092 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
COL16A1Q07092 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.79■□□□□ 0.92
COL16A1Q07092 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.79■□□□□ 0.92
COL16A1Q07092 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 AC018892.3-201ENST00000623986 2499 ntBASIC20.79■□□□□ 0.92
COL16A1Q07092 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
COL16A1Q07092 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL16A1Q07092 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.79■□□□□ 0.92
COL16A1Q07092 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL16A1Q07092 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 AL645937.2-201ENST00000396808 931 ntBASIC20.78■□□□□ 0.92
COL16A1Q07092 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.78■□□□□ 0.92
COL16A1Q07092 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 AC026803.1-201ENST00000569130 274 ntBASIC20.78■□□□□ 0.92
COL16A1Q07092 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 AC004466.1-201ENST00000599515 1080 ntBASIC20.78■□□□□ 0.92
COL16A1Q07092 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC20.78■□□□□ 0.92
COL16A1Q07092 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COL16A1Q07092 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 AC005915.1-201ENST00000624912 2018 ntBASIC20.78■□□□□ 0.92
COL16A1Q07092 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.78■□□□□ 0.92
COL16A1Q07092 AC130709.1-201ENST00000484779 1212 ntBASIC20.78■□□□□ 0.92
COL16A1Q07092 AC244250.3-201ENST00000620749 366 ntBASIC20.78■□□□□ 0.92
COL16A1Q07092 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.78■□□□□ 0.92
COL16A1Q07092 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
COL16A1Q07092 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL16A1Q07092 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
COL16A1Q07092 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL16A1Q07092 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.77■□□□□ 0.92
COL16A1Q07092 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL16A1Q07092 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.77■□□□□ 0.92
COL16A1Q07092 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL16A1Q07092 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL16A1Q07092 AL357563.1-201ENST00000404728 395 ntBASIC20.77■□□□□ 0.92
COL16A1Q07092 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC20.77■□□□□ 0.92
COL16A1Q07092 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.77■□□□□ 0.92
COL16A1Q07092 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
COL16A1Q07092 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.77■□□□□ 0.92
COL16A1Q07092 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
COL16A1Q07092 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.77■□□□□ 0.91
COL16A1Q07092 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL16A1Q07092 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL16A1Q07092 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.77■□□□□ 0.91
COL16A1Q07092 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
COL16A1Q07092 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
COL16A1Q07092 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.91
COL16A1Q07092 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
COL16A1Q07092 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.76■□□□□ 0.91
COL16A1Q07092 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC20.76■□□□□ 0.91
COL16A1Q07092 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 RPL8P2-201ENST00000430538 502 ntBASIC20.76■□□□□ 0.91
COL16A1Q07092 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.76■□□□□ 0.91
COL16A1Q07092 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC20.76■□□□□ 0.91
COL16A1Q07092 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 AC012158.2-201ENST00000536546 354 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms