Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SPCS3P61009 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.04□□□□□ -0.32
SPCS3P61009 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SPCS3P61009 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SPCS3P61009 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.04□□□□□ -0.32
SPCS3P61009 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SPCS3P61009 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.03□□□□□ -0.32
SPCS3P61009 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.03□□□□□ -0.32
SPCS3P61009 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SPCS3P61009 CICP24-201ENST00000605464 2705 ntBASIC13.03□□□□□ -0.32
SPCS3P61009 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 AC093724.1-201ENST00000448659 1027 ntBASIC13.03□□□□□ -0.32
SPCS3P61009 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 AP002469.2-201ENST00000531724 424 ntBASIC13.03□□□□□ -0.32
SPCS3P61009 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 OR7E47P-204ENST00000575924 449 ntBASIC13.03□□□□□ -0.32
SPCS3P61009 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.03□□□□□ -0.32
SPCS3P61009 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SPCS3P61009 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SPCS3P61009 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SPCS3P61009 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SPCS3P61009 AC136621.1-201ENST00000624017 2304 ntBASIC13.02□□□□□ -0.32
SPCS3P61009 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.02□□□□□ -0.32
SPCS3P61009 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPCS3P61009 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SPCS3P61009 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPCS3P61009 AC087481.3-201ENST00000602886 1894 ntBASIC13.02□□□□□ -0.32
SPCS3P61009 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.02□□□□□ -0.32
SPCS3P61009 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPCS3P61009 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SPCS3P61009 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPCS3P61009 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SPCS3P61009 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.02□□□□□ -0.32
SPCS3P61009 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SPCS3P61009 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 UPK3BP1-201ENST00000428678 509 ntBASIC13.02□□□□□ -0.33
SPCS3P61009 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 AC108073.2-201ENST00000464002 357 ntBASIC13.02□□□□□ -0.33
SPCS3P61009 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 CXCL1P1-201ENST00000502804 216 ntBASIC13.02□□□□□ -0.33
SPCS3P61009 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.02□□□□□ -0.33
SPCS3P61009 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 AC004790.2-201ENST00000623588 572 ntBASIC13.02□□□□□ -0.33
SPCS3P61009 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SPCS3P61009 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SPCS3P61009 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SPCS3P61009 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SPCS3P61009 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms