Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 OR7E47P-204ENST00000575924 449 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 ST20-AS1-201ENST00000560255 4223 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 LINC00528-201ENST00000600723 2160 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN12P56749 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN12P56749 AC005089.1-201ENST00000619486 2241 ntBASIC13.9□□□□□ -0.18
CLDN12P56749 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN12P56749 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN12P56749 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN12P56749 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN12P56749 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.9□□□□□ -0.19
CLDN12P56749 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.89□□□□□ -0.19
CLDN12P56749 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN12P56749 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 RPS2P1-201ENST00000434010 821 ntBASIC13.89□□□□□ -0.19
CLDN12P56749 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDN12P56749 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN12P56749 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CLDN12P56749 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDN12P56749 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLDN12P56749 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN12P56749 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CLDN12P56749 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN12P56749 AC018892.3-201ENST00000623986 2499 ntBASIC13.88□□□□□ -0.19
CLDN12P56749 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLDN12P56749 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN12P56749 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN12P56749 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
CLDN12P56749 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLDN12P56749 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN12P56749 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms