Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH6P55285 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH6P55285 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CDH6P55285 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH6P55285 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
CDH6P55285 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH6P55285 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH6P55285 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.56■□□□□ 0.24
CDH6P55285 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH6P55285 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH6P55285 BANF1P1-201ENST00000553684 263 ntBASIC16.56■□□□□ 0.24
CDH6P55285 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH6P55285 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH6P55285 MIR4313-201ENST00000580760 101 ntBASIC16.56■□□□□ 0.24
CDH6P55285 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.56■□□□□ 0.24
CDH6P55285 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH6P55285 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.56■□□□□ 0.24
CDH6P55285 SSR4P1-203ENST00000599569 2260 ntBASIC16.56■□□□□ 0.24
CDH6P55285 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.56■□□□□ 0.24
CDH6P55285 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH6P55285 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH6P55285 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.55■□□□□ 0.24
CDH6P55285 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH6P55285 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH6P55285 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 EEF1DP4-201ENST00000446006 880 ntBASIC16.55■□□□□ 0.24
CDH6P55285 PHKG1P2-201ENST00000457537 863 ntBASIC16.55■□□□□ 0.24
CDH6P55285 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH6P55285 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH6P55285 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 AL596442.2-201ENST00000610240 980 ntBASIC16.55■□□□□ 0.24
CDH6P55285 AL691403.2-201ENST00000618460 490 ntBASIC16.55■□□□□ 0.24
CDH6P55285 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH6P55285 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CDH6P55285 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.55■□□□□ 0.24
CDH6P55285 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 PPT1-215ENST00000641471 2368 ntBASIC16.55■□□□□ 0.24
CDH6P55285 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH6P55285 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH6P55285 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH6P55285 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH6P55285 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms