Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP11P51784 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.9■□□□□ 0.46
USP11P51784 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.9■□□□□ 0.46
USP11P51784 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP11P51784 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.9■□□□□ 0.46
USP11P51784 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP11P51784 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP11P51784 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP11P51784 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP11P51784 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.89■□□□□ 0.45
USP11P51784 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 PIN1P1-201ENST00000412108 996 ntBASIC17.89■□□□□ 0.45
USP11P51784 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.89■□□□□ 0.45
USP11P51784 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.89■□□□□ 0.45
USP11P51784 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.89■□□□□ 0.45
USP11P51784 AC138761.1-201ENST00000584393 385 ntBASIC17.89■□□□□ 0.45
USP11P51784 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.89■□□□□ 0.45
USP11P51784 AC004233.3-201ENST00000607794 1269 ntBASIC17.89■□□□□ 0.45
USP11P51784 AL391069.4-201ENST00000609583 481 ntBASIC17.89■□□□□ 0.45
USP11P51784 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
USP11P51784 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
USP11P51784 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
USP11P51784 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.89■□□□□ 0.45
USP11P51784 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
USP11P51784 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.89■□□□□ 0.45
USP11P51784 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP11P51784 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.88■□□□□ 0.45
USP11P51784 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USP11P51784 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
USP11P51784 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.88■□□□□ 0.45
USP11P51784 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.88■□□□□ 0.45
USP11P51784 AL353779.1-201ENST00000434793 351 ntBASIC17.88■□□□□ 0.45
USP11P51784 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.88■□□□□ 0.45
USP11P51784 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 TPRX2P-201ENST00000535362 881 ntBASIC17.88■□□□□ 0.45
USP11P51784 AC023310.3-201ENST00000557027 670 ntBASIC17.88■□□□□ 0.45
USP11P51784 AC100756.1-201ENST00000562736 682 ntBASIC17.88■□□□□ 0.45
USP11P51784 RARRES2P5-201ENST00000564013 466 ntBASIC17.88■□□□□ 0.45
USP11P51784 AC138749.3-201ENST00000567691 622 ntBASIC17.88■□□□□ 0.45
USP11P51784 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 AC116165.1-201ENST00000611806 668 ntBASIC17.88■□□□□ 0.45
USP11P51784 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.88■□□□□ 0.45
USP11P51784 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 AL391825.1-201ENST00000457671 1364 ntBASIC17.88■□□□□ 0.45
USP11P51784 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USP11P51784 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP11P51784 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.87■□□□□ 0.45
USP11P51784 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.87■□□□□ 0.45
USP11P51784 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
USP11P51784 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.87■□□□□ 0.45
USP11P51784 DFFBP1-201ENST00000433250 979 ntBASIC17.87■□□□□ 0.45
USP11P51784 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.87■□□□□ 0.45
USP11P51784 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.87■□□□□ 0.45
USP11P51784 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 2043.6 ms