Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
PCP4P48539 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PCP4P48539 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC10.62□□□□□ -0.71
PCP4P48539 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC10.62□□□□□ -0.71
PCP4P48539 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PCP4P48539 RBM39-203ENST00000361162 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PCP4P48539 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 BCO1-201ENST00000258168 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 ARHGAP36-206ENST00000639280 2685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 TPTE-205ENST00000622113 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 ADCY4-201ENST00000310677 3415 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 FLJ30679-201ENST00000624773 1980 ntBASIC10.61□□□□□ -0.71
PCP4P48539 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 CTSE-201ENST00000358184 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 ZNF221-204ENST00000592350 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC10.61□□□□□ -0.71
PCP4P48539 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 AC073439.1-201ENST00000624121 1774 ntBASIC10.61□□□□□ -0.71
PCP4P48539 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 PADI4-201ENST00000375448 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 PBX1-212ENST00000540236 6175 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 SPATA3-AS1-201ENST00000414876 3508 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 SLC12A4-209ENST00000572037 3620 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
PCP4P48539 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC10.61□□□□□ -0.71
PCP4P48539 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
PCP4P48539 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
PCP4P48539 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC10.6□□□□□ -0.71
PCP4P48539 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 AC112777.1-201ENST00000540175 1423 ntBASIC10.6□□□□□ -0.71
PCP4P48539 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC10.6□□□□□ -0.71
PCP4P48539 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC10.6□□□□□ -0.71
PCP4P48539 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
PCP4P48539 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC10.6□□□□□ -0.71
PCP4P48539 DBIL5P-203ENST00000536214 2677 ntBASIC10.6□□□□□ -0.71
PCP4P48539 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC10.6□□□□□ -0.71
PCP4P48539 HIST1H3G-201ENST00000614378 2411 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
PCP4P48539 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC10.6□□□□□ -0.71
PCP4P48539 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 FAM90A24P-201ENST00000520792 2369 ntBASIC10.6□□□□□ -0.71
PCP4P48539 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 ERCC1-202ENST00000300853 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
PCP4P48539 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
PCP4P48539 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms