Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CBX5P45973 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.8□□□□□ -0.2
CBX5P45973 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.8□□□□□ -0.2
CBX5P45973 AC087481.3-201ENST00000602886 1894 ntBASIC13.8□□□□□ -0.2
CBX5P45973 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CBX5P45973 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CBX5P45973 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CBX5P45973 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CBX5P45973 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CBX5P45973 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
CBX5P45973 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.79□□□□□ -0.2
CBX5P45973 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.79□□□□□ -0.2
CBX5P45973 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CBX5P45973 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CBX5P45973 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CBX5P45973 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CBX5P45973 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CBX5P45973 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CBX5P45973 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.78□□□□□ -0.2
CBX5P45973 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
CBX5P45973 AL109954.1-202ENST00000564051 2148 ntBASIC13.78□□□□□ -0.2
CBX5P45973 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.78□□□□□ -0.2
CBX5P45973 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.78□□□□□ -0.2
CBX5P45973 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CBX5P45973 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.78□□□□□ -0.2
CBX5P45973 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.78□□□□□ -0.2
CBX5P45973 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CBX5P45973 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.78□□□□□ -0.2
CBX5P45973 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.78□□□□□ -0.2
CBX5P45973 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.78□□□□□ -0.2
CBX5P45973 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CBX5P45973 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms