Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL365330.1-201ENST00000607459 531 ntBASIC13.1□□□□□ -0.31
NKX2-1P43699 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.1□□□□□ -0.31
NKX2-1P43699 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-1P43699 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 AL390755.1-201ENST00000623716 2027 ntBASIC13.1□□□□□ -0.31
NKX2-1P43699 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-1P43699 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-1P43699 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 AC139749.1-202ENST00000617529 3139 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 AC087386.2-201ENST00000623212 4637 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-1P43699 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
NKX2-1P43699 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 RBM17P3-201ENST00000417687 1192 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 MROH4P-201ENST00000431302 1578 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 ATP5G2P1-201ENST00000433580 426 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 KRT16P4-201ENST00000453883 522 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-1P43699 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-1P43699 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX2-1P43699 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 GGTLC5P-201ENST00000617623 998 ntBASIC13.09□□□□□ -0.31
NKX2-1P43699 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NKX2-1P43699 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX2-1P43699 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX2-1P43699 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.08□□□□□ -0.31
NKX2-1P43699 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
NKX2-1P43699 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-1P43699 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.08□□□□□ -0.31
NKX2-1P43699 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
NKX2-1P43699 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-1P43699 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-1P43699 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.08□□□□□ -0.31
NKX2-1P43699 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms