Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 AC090616.6-203ENST00000579186 1945 ntBASIC18.17■□□□□ 0.5
CLCN1P35523 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLCN1P35523 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.17■□□□□ 0.5
CLCN1P35523 HAL-202ENST00000538703 2637 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCN1P35523 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCN1P35523 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLCN1P35523 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLCN1P35523 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCN1P35523 AC073621.1-201ENST00000392730 636 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 ELK2BP-201ENST00000415014 1224 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 LAGE3P1-201ENST00000425356 484 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 KRT18P27-201ENST00000427733 1299 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 HNRNPDP1-201ENST00000439535 754 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CLCN1P35523 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.16■□□□□ 0.5
CLCN1P35523 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 AL121912.1-201ENST00000603683 238 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CLCN1P35523 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLCN1P35523 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLCN1P35523 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 C18orf15-201ENST00000623680 2534 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 AC008677.1-201ENST00000519230 1561 ntBASIC18.16■□□□□ 0.5
CLCN1P35523 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLCN1P35523 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCN1P35523 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN1P35523 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLCN1P35523 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.15■□□□□ 0.5
CLCN1P35523 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCN1P35523 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.15■□□□□ 0.5
CLCN1P35523 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.15■□□□□ 0.5
CLCN1P35523 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCN1P35523 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCN1P35523 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 AL021920.2-201ENST00000624828 1351 ntBASIC18.15■□□□□ 0.5
CLCN1P35523 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CLCN1P35523 KRT8P49-201ENST00000604166 1432 ntBASIC18.15■□□□□ 0.5
CLCN1P35523 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN1P35523 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CLCN1P35523 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms