Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RFC1P35251 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RFC1P35251 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RFC1P35251 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
RFC1P35251 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC1P35251 KRT8P37-201ENST00000451609 1420 ntBASIC16.79■□□□□ 0.28
RFC1P35251 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.79■□□□□ 0.28
RFC1P35251 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 HYMAI-201ENST00000635591 3347 ntBASIC16.78■□□□□ 0.28
RFC1P35251 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.78■□□□□ 0.28
RFC1P35251 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.78■□□□□ 0.28
RFC1P35251 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.78■□□□□ 0.28
RFC1P35251 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.78■□□□□ 0.28
RFC1P35251 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.78■□□□□ 0.28
RFC1P35251 MIR4453-201ENST00000584019 89 ntBASIC16.78■□□□□ 0.28
RFC1P35251 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 AL691403.2-201ENST00000618460 490 ntBASIC16.78■□□□□ 0.28
RFC1P35251 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
RFC1P35251 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC1P35251 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.78■□□□□ 0.28
RFC1P35251 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
RFC1P35251 NORAD-201ENST00000565493 5339 ntBASIC16.77■□□□□ 0.28
RFC1P35251 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.77■□□□□ 0.28
RFC1P35251 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
RFC1P35251 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.77■□□□□ 0.28
RFC1P35251 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 EEF1DP4-201ENST00000446006 880 ntBASIC16.77■□□□□ 0.28
RFC1P35251 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC1P35251 AL512356.2-201ENST00000546955 174 ntBASIC16.77■□□□□ 0.28
RFC1P35251 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
RFC1P35251 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.77■□□□□ 0.28
RFC1P35251 AL133215.2-201ENST00000609242 977 ntBASIC16.77■□□□□ 0.28
RFC1P35251 AC007967.4-201ENST00000614700 386 ntBASIC16.77■□□□□ 0.28
RFC1P35251 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC1P35251 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.77■□□□□ 0.27
RFC1P35251 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.77■□□□□ 0.27
RFC1P35251 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFC1P35251 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.77■□□□□ 0.27
RFC1P35251 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RFC1P35251 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.76■□□□□ 0.27
RFC1P35251 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RFC1P35251 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC1P35251 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.76■□□□□ 0.27
RFC1P35251 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC1P35251 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms