Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.1■□□□□ 0.97
USP6P35125 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC21.1■□□□□ 0.97
USP6P35125 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
USP6P35125 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
USP6P35125 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC21.09■□□□□ 0.97
USP6P35125 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.09■□□□□ 0.97
USP6P35125 HOMER2P2-201ENST00000451621 847 ntBASIC21.09■□□□□ 0.97
USP6P35125 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.09■□□□□ 0.97
USP6P35125 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 AL022328.3-201ENST00000607943 679 ntBASIC21.09■□□□□ 0.97
USP6P35125 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC21.09■□□□□ 0.97
USP6P35125 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC21.09■□□□□ 0.97
USP6P35125 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 AC018735.1-201ENST00000437208 1502 ntBASIC21.09■□□□□ 0.97
USP6P35125 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
USP6P35125 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
USP6P35125 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
USP6P35125 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC21.08■□□□□ 0.97
USP6P35125 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
USP6P35125 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
USP6P35125 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.08■□□□□ 0.97
USP6P35125 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 BTBD6P1-201ENST00000412176 1267 ntBASIC21.08■□□□□ 0.97
USP6P35125 CALR4P-201ENST00000431943 946 ntBASIC21.08■□□□□ 0.97
USP6P35125 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.08■□□□□ 0.97
USP6P35125 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC21.08■□□□□ 0.97
USP6P35125 AC091804.1-201ENST00000486888 567 ntBASIC21.08■□□□□ 0.97
USP6P35125 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC21.08■□□□□ 0.97
USP6P35125 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
USP6P35125 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC21.08■□□□□ 0.97
USP6P35125 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC21.08■□□□□ 0.97
USP6P35125 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
USP6P35125 NKILA-202ENST00000614771 2598 ntBASIC21.08■□□□□ 0.96
USP6P35125 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
USP6P35125 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
USP6P35125 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP6P35125 LINC02447-202ENST00000501888 2146 ntBASIC21.08■□□□□ 0.96
USP6P35125 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP6P35125 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP6P35125 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
USP6P35125 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 HSPB1P2-201ENST00000448722 546 ntBASIC21.07■□□□□ 0.96
USP6P35125 AC114812.1-204ENST00000449669 728 ntBASIC21.07■□□□□ 0.96
USP6P35125 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC21.07■□□□□ 0.96
USP6P35125 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
USP6P35125 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP6P35125 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP6P35125 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
USP6P35125 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
USP6P35125 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
USP6P35125 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
USP6P35125 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.07■□□□□ 0.96
USP6P35125 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.07■□□□□ 0.96
USP6P35125 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
USP6P35125 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.07■□□□□ 0.96
USP6P35125 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC21.07■□□□□ 0.96
USP6P35125 AC015818.8-201ENST00000587907 1519 ntBASIC21.07■□□□□ 0.96
USP6P35125 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
USP6P35125 KRT8P14-201ENST00000414254 1442 ntBASIC21.06■□□□□ 0.96
USP6P35125 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
USP6P35125 MPV17-205ENST00000402310 906 ntTSL 5 BASIC21.06■□□□□ 0.96
USP6P35125 AL139094.1-201ENST00000405549 1188 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms