Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCKBRP32239 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 AZGP1P1-201ENST00000411909 902 ntBASIC15.26■□□□□ 0.03
CCKBRP32239 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCKBRP32239 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.26■□□□□ 0.03
CCKBRP32239 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.26■□□□□ 0.03
CCKBRP32239 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.26■□□□□ 0.03
CCKBRP32239 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.26■□□□□ 0.03
CCKBRP32239 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 FLJ38576-201ENST00000623820 2459 ntBASIC15.26■□□□□ 0.03
CCKBRP32239 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
CCKBRP32239 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCKBRP32239 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCKBRP32239 AC078925.2-201ENST00000624013 1973 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCKBRP32239 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CCKBRP32239 RNF216P1-203ENST00000404404 2427 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.25■□□□□ 0.03
CCKBRP32239 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.25■□□□□ 0.03
CCKBRP32239 USP32P1-208ENST00000506594 1164 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.25■□□□□ 0.03
CCKBRP32239 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 MIR4259-201ENST00000584466 101 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 AC233724.13-201ENST00000598383 410 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 MIR6775-201ENST00000617557 69 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
CCKBRP32239 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.25■□□□□ 0.03
CCKBRP32239 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCKBRP32239 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCKBRP32239 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCKBRP32239 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCKBRP32239 HLA-A-202ENST00000376806 1854 ntBASIC15.25■□□□□ 0.03
CCKBRP32239 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.25■□□□□ 0.03
CCKBRP32239 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCKBRP32239 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms