Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CD40LGP29965 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CD40LGP29965 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.17□□□□□ -0.14
CD40LGP29965 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CD40LGP29965 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CD40LGP29965 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 KRT18P35-201ENST00000510488 1269 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 AC090616.6-201ENST00000582640 721 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 AC011498.5-201ENST00000592027 486 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 AC020765.3-201ENST00000613051 740 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 AC083849.1-201ENST00000615227 514 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 HYMAI.1-201ENST00000620949 238 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.17□□□□□ -0.14
CD40LGP29965 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD40LGP29965 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CD40LGP29965 AC092135.3-201ENST00000624151 1846 ntBASIC14.17□□□□□ -0.14
CD40LGP29965 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.17□□□□□ -0.14
CD40LGP29965 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.17□□□□□ -0.14
CD40LGP29965 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.17□□□□□ -0.14
CD40LGP29965 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD40LGP29965 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD40LGP29965 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 Z83836.1-201ENST00000624605 1642 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CD40LGP29965 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CD40LGP29965 ZBED1P1-201ENST00000502364 1930 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.16□□□□□ -0.14
CD40LGP29965 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 PCED1CP-201ENST00000419887 785 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 VENTXP7-201ENST00000475503 772 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 AL121672.3-201ENST00000608644 468 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD40LGP29965 IER3-202ENST00000376377 1350 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 AC126335.2-201ENST00000623362 4637 ntBASIC14.16□□□□□ -0.14
CD40LGP29965 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CD40LGP29965 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD40LGP29965 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms