Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RXRBP28702 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.32■□□□□ 0.84
RXRBP28702 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.32■□□□□ 0.84
RXRBP28702 PAM16-211ENST00000575848 518 ntTSL 3 BASIC20.32■□□□□ 0.84
RXRBP28702 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 AC073911.3-201ENST00000624401 631 ntBASIC20.32■□□□□ 0.84
RXRBP28702 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
RXRBP28702 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
RXRBP28702 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.31■□□□□ 0.84
RXRBP28702 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RXRBP28702 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRBP28702 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RXRBP28702 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.31■□□□□ 0.84
RXRBP28702 AC026320.2-201ENST00000434379 478 ntBASIC20.31■□□□□ 0.84
RXRBP28702 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.31■□□□□ 0.84
RXRBP28702 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC20.31■□□□□ 0.84
RXRBP28702 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.31■□□□□ 0.84
RXRBP28702 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRBP28702 MIR3677-201ENST00000578964 60 ntBASIC20.31■□□□□ 0.84
RXRBP28702 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC20.31■□□□□ 0.84
RXRBP28702 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.31■□□□□ 0.84
RXRBP28702 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RXRBP28702 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRBP28702 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.31■□□□□ 0.84
RXRBP28702 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RXRBP28702 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.31■□□□□ 0.84
RXRBP28702 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RXRBP28702 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RXRBP28702 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RXRBP28702 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRBP28702 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC20.3■□□□□ 0.84
RXRBP28702 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.3■□□□□ 0.84
RXRBP28702 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RXRBP28702 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RXRBP28702 MIR4783-201ENST00000580343 82 ntBASIC20.3■□□□□ 0.84
RXRBP28702 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.3■□□□□ 0.84
RXRBP28702 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
RXRBP28702 AC087392.5-201ENST00000612517 489 ntBASIC20.3■□□□□ 0.84
RXRBP28702 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.3■□□□□ 0.84
RXRBP28702 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RXRBP28702 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRBP28702 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.3■□□□□ 0.84
RXRBP28702 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
RXRBP28702 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RXRBP28702 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RXRBP28702 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RXRBP28702 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRBP28702 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.29■□□□□ 0.84
RXRBP28702 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RXRBP28702 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRBP28702 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRBP28702 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.29■□□□□ 0.84
RXRBP28702 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
RXRBP28702 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.29■□□□□ 0.84
RXRBP28702 AL139094.1-201ENST00000405549 1188 ntBASIC20.29■□□□□ 0.84
RXRBP28702 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RXRBP28702 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RXRBP28702 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.29■□□□□ 0.84
RXRBP28702 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.29■□□□□ 0.84
RXRBP28702 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.29■□□□□ 0.84
RXRBP28702 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RXRBP28702 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.29■□□□□ 0.84
RXRBP28702 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms