Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
HTR1EP28566 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
HTR1EP28566 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.29■□□□□ 0.04
HTR1EP28566 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HTR1EP28566 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.29■□□□□ 0.04
HTR1EP28566 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.29■□□□□ 0.04
HTR1EP28566 AC005498.2-205ENST00000593218 784 ntBASIC15.29■□□□□ 0.04
HTR1EP28566 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.29■□□□□ 0.04
HTR1EP28566 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 AC092902.6-201ENST00000641783 218 ntBASIC15.29■□□□□ 0.04
HTR1EP28566 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 AC063926.3-201ENST00000624734 5658 ntBASIC15.29■□□□□ 0.04
HTR1EP28566 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
HTR1EP28566 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HTR1EP28566 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
HTR1EP28566 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HTR1EP28566 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1EP28566 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 CICP24-201ENST00000605464 2705 ntBASIC15.28■□□□□ 0.04
HTR1EP28566 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HTR1EP28566 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1EP28566 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
HTR1EP28566 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1EP28566 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.28■□□□□ 0.04
HTR1EP28566 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 AC069262.1-201ENST00000539058 672 ntBASIC15.28■□□□□ 0.04
HTR1EP28566 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.28■□□□□ 0.04
HTR1EP28566 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.28■□□□□ 0.04
HTR1EP28566 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 LINC00628-201ENST00000628516 1289 ntBASIC15.28■□□□□ 0.04
HTR1EP28566 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 TCAF2P1-201ENST00000291129 2421 ntBASIC15.28■□□□□ 0.04
HTR1EP28566 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.28■□□□□ 0.04
HTR1EP28566 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HTR1EP28566 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HTR1EP28566 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1EP28566 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
HTR1EP28566 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1EP28566 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 LINC01101-201ENST00000622953 1884 ntBASIC15.27■□□□□ 0.04
HTR1EP28566 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1EP28566 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.27■□□□□ 0.04
HTR1EP28566 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HTR1EP28566 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HTR1EP28566 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms