Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LAMA1P25391 HOMER2P2-201ENST00000451621 847 ntBASIC15.25■□□□□ 0.03
LAMA1P25391 RN7SL48P-201ENST00000579283 293 ntBASIC15.25■□□□□ 0.03
LAMA1P25391 AC097359.3-201ENST00000603982 1210 ntBASIC15.25■□□□□ 0.03
LAMA1P25391 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.25■□□□□ 0.03
LAMA1P25391 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.25■□□□□ 0.03
LAMA1P25391 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LAMA1P25391 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.25■□□□□ 0.03
LAMA1P25391 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.25■□□□□ 0.03
LAMA1P25391 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.25■□□□□ 0.03
LAMA1P25391 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.25■□□□□ 0.03
LAMA1P25391 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.25■□□□□ 0.03
LAMA1P25391 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.25■□□□□ 0.03
LAMA1P25391 AC126915.1-201ENST00000522847 1038 ntBASIC15.25■□□□□ 0.03
LAMA1P25391 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.25■□□□□ 0.03
LAMA1P25391 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.25■□□□□ 0.03
LAMA1P25391 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.25■□□□□ 0.03
LAMA1P25391 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LAMA1P25391 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.24■□□□□ 0.03
LAMA1P25391 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 RN7SL11P-201ENST00000471305 293 ntBASIC15.24■□□□□ 0.03
LAMA1P25391 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.24■□□□□ 0.03
LAMA1P25391 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LAMA1P25391 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.24■□□□□ 0.03
LAMA1P25391 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.24■□□□□ 0.03
LAMA1P25391 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
LAMA1P25391 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.24■□□□□ 0.03
LAMA1P25391 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.24■□□□□ 0.03
LAMA1P25391 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.24■□□□□ 0.03
LAMA1P25391 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.24■□□□□ 0.03
LAMA1P25391 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 FGFR3P5-201ENST00000564496 886 ntBASIC15.24■□□□□ 0.03
LAMA1P25391 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.24■□□□□ 0.03
LAMA1P25391 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
LAMA1P25391 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.24■□□□□ 0.03
LAMA1P25391 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LAMA1P25391 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LAMA1P25391 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 HSPB1P2-201ENST00000448722 546 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.23■□□□□ 0.03
LAMA1P25391 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.23■□□□□ 0.03
LAMA1P25391 AC006453.4-201ENST00000636949 1252 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LAMA1P25391 FTLP10-202ENST00000505798 471 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.23■□□□□ 0.03
LAMA1P25391 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LAMA1P25391 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.23■□□□□ 0.03
LAMA1P25391 AC023310.1-201ENST00000554836 735 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 YRDCP1-201ENST00000621419 643 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 AL354989.2-201ENST00000435838 1540 ntBASIC15.23■□□□□ 0.03
LAMA1P25391 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LAMA1P25391 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LAMA1P25391 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms