Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.44□□□□□ -0.26
COL8A2P25067 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.44□□□□□ -0.26
COL8A2P25067 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
COL8A2P25067 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.44□□□□□ -0.26
COL8A2P25067 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 AC074044.1-201ENST00000609673 707 ntBASIC13.44□□□□□ -0.26
COL8A2P25067 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.44□□□□□ -0.26
COL8A2P25067 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.44□□□□□ -0.26
COL8A2P25067 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL8A2P25067 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COL8A2P25067 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
COL8A2P25067 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.43□□□□□ -0.26
COL8A2P25067 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.43□□□□□ -0.26
COL8A2P25067 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
COL8A2P25067 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
COL8A2P25067 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 DGCR5-201ENST00000399539 862 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 NME2P1-201ENST00000426182 414 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.43□□□□□ -0.26
COL8A2P25067 AC093004.1-201ENST00000508850 424 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.43□□□□□ -0.26
COL8A2P25067 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.43□□□□□ -0.26
COL8A2P25067 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.43□□□□□ -0.26
COL8A2P25067 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
COL8A2P25067 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.43□□□□□ -0.26
COL8A2P25067 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.43□□□□□ -0.26
COL8A2P25067 AC140912.1-201ENST00000577171 1054 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COL8A2P25067 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.43□□□□□ -0.26
COL8A2P25067 SLC7A15P-201ENST00000424028 1363 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 AL391825.1-201ENST00000457671 1364 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 AC144831.1-201ENST00000573312 2656 ntBASIC13.43□□□□□ -0.26
COL8A2P25067 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL8A2P25067 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.42□□□□□ -0.26
COL8A2P25067 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
COL8A2P25067 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
COL8A2P25067 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 EEF1DP4-201ENST00000446006 880 ntBASIC13.42□□□□□ -0.26
COL8A2P25067 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.42□□□□□ -0.26
COL8A2P25067 GAPDHP21-201ENST00000450301 1010 ntBASIC13.42□□□□□ -0.26
COL8A2P25067 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
COL8A2P25067 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.42□□□□□ -0.26
COL8A2P25067 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.42□□□□□ -0.26
COL8A2P25067 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms