Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.93□□□□□ -0.02
CHMP24386 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP24386 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
CHMP24386 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP24386 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP24386 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHMP24386 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 AC069335.1-201ENST00000489972 472 ntBASIC14.93□□□□□ -0.02
CHMP24386 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.93□□□□□ -0.02
CHMP24386 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.93□□□□□ -0.02
CHMP24386 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.93□□□□□ -0.02
CHMP24386 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 AC008677.1-201ENST00000519230 1561 ntBASIC14.93□□□□□ -0.02
CHMP24386 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 AC020658.6-201ENST00000623564 1870 ntBASIC14.93□□□□□ -0.02
CHMP24386 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 C8orf49-201ENST00000525043 1968 ntBASIC14.93□□□□□ -0.02
CHMP24386 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHMP24386 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHMP24386 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHMP24386 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 MIR346-201ENST00000362234 95 ntBASIC14.92□□□□□ -0.02
CHMP24386 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.92□□□□□ -0.02
CHMP24386 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 KRT18P32-201ENST00000424695 1287 ntBASIC14.92□□□□□ -0.02
CHMP24386 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 AL645939.2-201ENST00000427340 991 ntBASIC14.92□□□□□ -0.02
CHMP24386 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 HLA-J-203ENST00000494367 1087 ntBASIC14.92□□□□□ -0.02
CHMP24386 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.92□□□□□ -0.02
CHMP24386 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 AC105233.2-201ENST00000523697 349 ntBASIC14.92□□□□□ -0.02
CHMP24386 AF228730.5-201ENST00000530288 346 ntBASIC14.92□□□□□ -0.02
CHMP24386 AC093520.2-201ENST00000561830 333 ntBASIC14.92□□□□□ -0.02
CHMP24386 AC025678.2-201ENST00000562061 970 ntBASIC14.92□□□□□ -0.02
CHMP24386 AC073389.1-201ENST00000595595 795 ntBASIC14.92□□□□□ -0.02
CHMP24386 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHMP24386 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.92□□□□□ -0.02
CHMP24386 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHMP24386 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms