Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 AZGP1P1-201ENST00000411909 902 ntBASIC17.09■□□□□ 0.33
CD58P19256 SPDYE17-201ENST00000412399 783 ntBASIC17.09■□□□□ 0.33
CD58P19256 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 CYMP-203ENST00000474680 1263 ntBASIC17.09■□□□□ 0.33
CD58P19256 HLA-V-204ENST00000476601 1289 ntBASIC17.09■□□□□ 0.33
CD58P19256 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 TEX28P1-201ENST00000613479 1221 ntBASIC17.09■□□□□ 0.33
CD58P19256 TEX28P2-201ENST00000617764 1221 ntBASIC17.09■□□□□ 0.33
CD58P19256 AL390754.1-201ENST00000619088 582 ntBASIC17.09■□□□□ 0.33
CD58P19256 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 KRT8P12-202ENST00000472924 1397 ntBASIC17.09■□□□□ 0.33
CD58P19256 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 AP005117.1-202ENST00000581724 1908 ntBASIC17.09■□□□□ 0.33
CD58P19256 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.09■□□□□ 0.33
CD58P19256 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CD58P19256 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD58P19256 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.08■□□□□ 0.33
CD58P19256 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CD58P19256 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.08■□□□□ 0.33
CD58P19256 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CD58P19256 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CD58P19256 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.08■□□□□ 0.33
CD58P19256 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CD58P19256 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.08■□□□□ 0.33
CD58P19256 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CD58P19256 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.08■□□□□ 0.33
CD58P19256 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.08■□□□□ 0.32
CD58P19256 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CD58P19256 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CD58P19256 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.08■□□□□ 0.32
CD58P19256 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.08■□□□□ 0.32
CD58P19256 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.08■□□□□ 0.32
CD58P19256 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.08■□□□□ 0.32
CD58P19256 AL158211.3-201ENST00000607385 239 ntBASIC17.08■□□□□ 0.32
CD58P19256 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CD58P19256 LINC00554-201ENST00000564841 3011 ntBASIC17.08■□□□□ 0.32
CD58P19256 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD58P19256 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CD58P19256 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.07■□□□□ 0.32
CD58P19256 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.07■□□□□ 0.32
CD58P19256 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.07■□□□□ 0.32
CD58P19256 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.07■□□□□ 0.32
CD58P19256 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CD58P19256 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.07■□□□□ 0.32
CD58P19256 AL390955.2-201ENST00000603032 514 ntBASIC17.07■□□□□ 0.32
CD58P19256 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.07■□□□□ 0.32
CD58P19256 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.07■□□□□ 0.32
CD58P19256 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD58P19256 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms