Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SYN1P17600 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SYN1P17600 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SYN1P17600 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.09■□□□□ 0.33
SYN1P17600 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYN1P17600 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYN1P17600 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYN1P17600 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYN1P17600 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
SYN1P17600 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.08■□□□□ 0.33
SYN1P17600 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.08■□□□□ 0.33
SYN1P17600 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.08■□□□□ 0.32
SYN1P17600 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.08■□□□□ 0.32
SYN1P17600 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SYN1P17600 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.08■□□□□ 0.32
SYN1P17600 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.08■□□□□ 0.32
SYN1P17600 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.08■□□□□ 0.32
SYN1P17600 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.08■□□□□ 0.32
SYN1P17600 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.08■□□□□ 0.32
SYN1P17600 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.08■□□□□ 0.32
SYN1P17600 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.08■□□□□ 0.32
SYN1P17600 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.08■□□□□ 0.32
SYN1P17600 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SYN1P17600 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYN1P17600 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SYN1P17600 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SYN1P17600 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.07■□□□□ 0.32
SYN1P17600 AL008707.1-201ENST00000422498 534 ntBASIC17.07■□□□□ 0.32
SYN1P17600 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 FGFR3P1-201ENST00000449999 601 ntBASIC17.07■□□□□ 0.32
SYN1P17600 AC234782.1-201ENST00000451950 919 ntBASIC17.07■□□□□ 0.32
SYN1P17600 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.07■□□□□ 0.32
SYN1P17600 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.07■□□□□ 0.32
SYN1P17600 AL645939.5-201ENST00000606834 243 ntBASIC17.07■□□□□ 0.32
SYN1P17600 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.07■□□□□ 0.32
SYN1P17600 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SYN1P17600 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
SYN1P17600 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SYN1P17600 REXO1L1P-202ENST00000608646 1974 ntBASIC17.07■□□□□ 0.32
SYN1P17600 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.07■□□□□ 0.32
SYN1P17600 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYN1P17600 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SYN1P17600 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.06■□□□□ 0.32
SYN1P17600 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.06■□□□□ 0.32
SYN1P17600 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.06■□□□□ 0.32
SYN1P17600 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.06■□□□□ 0.32
SYN1P17600 AC005740.2-201ENST00000511085 419 ntBASIC17.06■□□□□ 0.32
SYN1P17600 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYN1P17600 PGAM1P5-201ENST00000548011 764 ntBASIC17.06■□□□□ 0.32
SYN1P17600 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms