Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.45■□□□□ 0.86
MS4A1P11836 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
MS4A1P11836 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.45■□□□□ 0.86
MS4A1P11836 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 AC022145.2-201ENST00000598203 171 ntBASIC20.45■□□□□ 0.86
MS4A1P11836 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.45■□□□□ 0.86
MS4A1P11836 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MS4A1P11836 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC20.45■□□□□ 0.86
MS4A1P11836 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
MS4A1P11836 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MS4A1P11836 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.44■□□□□ 0.86
MS4A1P11836 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.44■□□□□ 0.86
MS4A1P11836 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MS4A1P11836 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MS4A1P11836 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
MS4A1P11836 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.44■□□□□ 0.86
MS4A1P11836 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.44■□□□□ 0.86
MS4A1P11836 RARRES2P9-201ENST00000565168 469 ntBASIC20.44■□□□□ 0.86
MS4A1P11836 MIR3687-2-201ENST00000577708 61 ntBASIC20.44■□□□□ 0.86
MS4A1P11836 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.44■□□□□ 0.86
MS4A1P11836 MIR3687-1-201ENST00000614492 61 ntBASIC20.44■□□□□ 0.86
MS4A1P11836 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.44■□□□□ 0.86
MS4A1P11836 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.44■□□□□ 0.86
MS4A1P11836 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.44■□□□□ 0.86
MS4A1P11836 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MS4A1P11836 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A1P11836 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 AC005237.2-201ENST00000434368 219 ntBASIC20.43■□□□□ 0.86
MS4A1P11836 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A1P11836 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A1P11836 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.43■□□□□ 0.86
MS4A1P11836 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.43■□□□□ 0.86
MS4A1P11836 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.43■□□□□ 0.86
MS4A1P11836 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A1P11836 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.43■□□□□ 0.86
MS4A1P11836 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.43■□□□□ 0.86
MS4A1P11836 AL513210.1-201ENST00000629608 234 ntBASIC20.43■□□□□ 0.86
MS4A1P11836 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.43■□□□□ 0.86
MS4A1P11836 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MS4A1P11836 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC20.43■□□□□ 0.86
MS4A1P11836 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MS4A1P11836 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A1P11836 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A1P11836 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A1P11836 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A1P11836 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A1P11836 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MS4A1P11836 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.42■□□□□ 0.86
MS4A1P11836 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms