Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.8□□□□□ -0.04
UBL4AP11441 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.8□□□□□ -0.04
UBL4AP11441 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.8□□□□□ -0.04
UBL4AP11441 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.8□□□□□ -0.04
UBL4AP11441 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.8□□□□□ -0.04
UBL4AP11441 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.8□□□□□ -0.04
UBL4AP11441 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
UBL4AP11441 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
UBL4AP11441 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.8□□□□□ -0.04
UBL4AP11441 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 PAUPAR-201ENST00000630360 2965 ntBASIC14.79□□□□□ -0.04
UBL4AP11441 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.79□□□□□ -0.04
UBL4AP11441 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
UBL4AP11441 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
UBL4AP11441 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.79□□□□□ -0.04
UBL4AP11441 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.79□□□□□ -0.04
UBL4AP11441 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.79□□□□□ -0.04
UBL4AP11441 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 RARRES2P9-201ENST00000565168 469 ntBASIC14.79□□□□□ -0.04
UBL4AP11441 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
UBL4AP11441 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
UBL4AP11441 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.79□□□□□ -0.04
UBL4AP11441 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 AP3S2-216ENST00000617003 1561 ntBASIC14.79□□□□□ -0.04
UBL4AP11441 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
UBL4AP11441 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
UBL4AP11441 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.79□□□□□ -0.04
UBL4AP11441 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms