Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
THRAP10827 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THRAP10827 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.04■□□□□ 0.16
THRAP10827 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THRAP10827 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
THRAP10827 PCGF3-213ENST00000620529 1899 ntBASIC16.03■□□□□ 0.16
THRAP10827 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.03■□□□□ 0.16
THRAP10827 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.03■□□□□ 0.16
THRAP10827 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.03■□□□□ 0.16
THRAP10827 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
THRAP10827 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 MIR346-201ENST00000362234 95 ntBASIC16.03■□□□□ 0.16
THRAP10827 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.03■□□□□ 0.16
THRAP10827 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.03■□□□□ 0.16
THRAP10827 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
THRAP10827 AC107890.1-201ENST00000422478 521 ntBASIC16.03■□□□□ 0.16
THRAP10827 AC055876.3-201ENST00000431496 288 ntBASIC16.03■□□□□ 0.16
THRAP10827 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.03■□□□□ 0.16
THRAP10827 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.03■□□□□ 0.16
THRAP10827 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.03■□□□□ 0.16
THRAP10827 RNA5SP421-201ENST00000516864 134 ntBASIC16.03■□□□□ 0.16
THRAP10827 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.03■□□□□ 0.16
THRAP10827 MIR4492-201ENST00000581627 80 ntBASIC16.03■□□□□ 0.16
THRAP10827 AC027307.2-201ENST00000591252 911 ntBASIC16.03■□□□□ 0.16
THRAP10827 AC138649.4-201ENST00000612222 287 ntBASIC16.03■□□□□ 0.16
THRAP10827 AJ011932.1-201ENST00000621707 465 ntBASIC16.03■□□□□ 0.16
THRAP10827 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.03■□□□□ 0.16
THRAP10827 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 AC008677.1-201ENST00000519230 1561 ntBASIC16.03■□□□□ 0.16
THRAP10827 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
THRAP10827 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.03■□□□□ 0.16
THRAP10827 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.03■□□□□ 0.16
THRAP10827 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
THRAP10827 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
THRAP10827 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
THRAP10827 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.02■□□□□ 0.16
THRAP10827 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
THRAP10827 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 TNRC18P2-201ENST00000417666 2714 ntBASIC16.02■□□□□ 0.16
THRAP10827 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.02■□□□□ 0.16
THRAP10827 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.02■□□□□ 0.16
THRAP10827 MIR943-201ENST00000401286 94 ntBASIC16.02■□□□□ 0.16
THRAP10827 AL035633.1-201ENST00000406139 838 ntBASIC16.02■□□□□ 0.16
THRAP10827 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.02■□□□□ 0.16
THRAP10827 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
THRAP10827 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
THRAP10827 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.02■□□□□ 0.16
THRAP10827 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.02■□□□□ 0.16
THRAP10827 AC140878.1-201ENST00000565277 250 ntBASIC16.02■□□□□ 0.16
THRAP10827 AC021097.1-201ENST00000607902 574 ntBASIC16.02■□□□□ 0.16
THRAP10827 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
THRAP10827 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.02■□□□□ 0.15
THRAP10827 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.02■□□□□ 0.15
THRAP10827 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
THRAP10827 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
THRAP10827 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms