Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RARAP10276 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.73■□□□□ 0.27
RARAP10276 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RARAP10276 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.72■□□□□ 0.27
RARAP10276 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RARAP10276 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.72■□□□□ 0.27
RARAP10276 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RARAP10276 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RARAP10276 RPS8P6-201ENST00000426177 609 ntBASIC16.72■□□□□ 0.27
RARAP10276 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.72■□□□□ 0.27
RARAP10276 RARRES2P9-201ENST00000565168 469 ntBASIC16.72■□□□□ 0.27
RARAP10276 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
RARAP10276 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.72■□□□□ 0.27
RARAP10276 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RARAP10276 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RARAP10276 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.72■□□□□ 0.27
RARAP10276 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.71■□□□□ 0.27
RARAP10276 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RARAP10276 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RARAP10276 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.71■□□□□ 0.27
RARAP10276 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.71■□□□□ 0.27
RARAP10276 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RARAP10276 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.71■□□□□ 0.27
RARAP10276 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
RARAP10276 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 AC055717.3-201ENST00000622967 595 ntBASIC16.71■□□□□ 0.27
RARAP10276 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RARAP10276 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.71■□□□□ 0.27
RARAP10276 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RARAP10276 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RARAP10276 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.71■□□□□ 0.27
RARAP10276 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
RARAP10276 AC018892.3-201ENST00000623986 2499 ntBASIC16.71■□□□□ 0.26
RARAP10276 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.71■□□□□ 0.26
RARAP10276 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RARAP10276 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RARAP10276 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RARAP10276 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RARAP10276 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
RARAP10276 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.7■□□□□ 0.26
RARAP10276 AL627223.1-201ENST00000416693 442 ntBASIC16.7■□□□□ 0.26
RARAP10276 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.7■□□□□ 0.26
RARAP10276 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.7■□□□□ 0.26
RARAP10276 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.7■□□□□ 0.26
RARAP10276 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.7■□□□□ 0.26
RARAP10276 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.7■□□□□ 0.26
RARAP10276 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RARAP10276 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms