Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AP003680.1-201ENST00000598970 3660 ntBASIC17.27■□□□□ 0.36
CCDC172P0C7W6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AL355306.1-201ENST00000415580 579 ntBASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AL135744.1-201ENST00000565098 629 ntBASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AL138918.1-201ENST00000568306 659 ntBASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AC061975.2-201ENST00000581722 295 ntBASIC17.27■□□□□ 0.36
CCDC172P0C7W6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCDC172P0C7W6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC172P0C7W6 AC020658.6-201ENST00000623564 1870 ntBASIC17.27■□□□□ 0.35
CCDC172P0C7W6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AC134407.2-201ENST00000625089 1978 ntBASIC17.26■□□□□ 0.35
CCDC172P0C7W6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AC027307.2-201ENST00000591252 911 ntBASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AC091812.2-201ENST00000619081 385 ntBASIC17.26■□□□□ 0.35
CCDC172P0C7W6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC172P0C7W6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 TMBIM7P-203ENST00000641617 1718 ntBASIC17.25■□□□□ 0.35
CCDC172P0C7W6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AL691432.1-201ENST00000596308 1422 ntBASIC17.25■□□□□ 0.35
CCDC172P0C7W6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms